Monarch Initiative

Enhancing knowledge with a vast graph.

Monarch Initiative Explorer: Enhance Your Knowledge with Biomedical Data

Discover, explore, and learn with the Monarch Initiative Explorer, a powerful tool for searching and retrieving biomedical information.

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Monarch Initiative

Monarch Initiative

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Exploring the Biology and Medicine World with Monarch Initiative Explorer: A Powerful Knowledge Graph Plugin - 2023

The Monarch Initiative Explorer is a remarkable plugin that greatly enhances the capabilities of ChatGPT by providing access to a vast knowledge graph of biomedical data. With this plugin, users can effortlessly search for and retrieve information about genes, diseases, and phenotypes, expanding their knowledge base and delving into the interconnected world of biology and medicine.

To begin using the Monarch Initiative Explorer, there are two simple methods. You can either search for it directly in the ChatGPT plugin store or click the convenient "try it" button located at the top right of the page. Once installed, you'll have access to a wide range of features and functionalities.

Using the plugin is a breeze. The primary function is the ability to search for specific entities within the Monarch knowledge graph. Whether you're searching for genes, diseases, or phenotypes, you can enter their name and retrieve the associated ontology identifier. This feature enables you to quickly gather the information you need.

Once you have the ontology identifier, the Monarch Initiative Explorer allows you to retrieve detailed information about the entity of interest. This includes associations between entities, general information about sets of entities, and related genes and diseases. With this comprehensive access to biomedical data, researchers, students, and curious individuals alike can deepen their understanding of various biological concepts.

One particularly useful feature is the semantic similarity search, also known as a fuzzy search. This search option enables you to find similarities between genes and/or diseases when you're unsure about the exact name or identifier. It's a great tool for exploring related concepts and expanding your knowledge in a more flexible manner.

To illustrate how the plugin works, here are a couple of example prompts you can use:

1. "Search for the disease 'Cystic Fibrosis' in the Monarch Initiative Explorer."
2. "Retrieve information about the gene 'HGNC:1884' using the Monarch Initiative Explorer."

It's important to note that the Monarch Initiative Explorer is not intended for clinical decision making, diagnoses, or any form of medical advice. Instead, it serves as a valuable tool for exploration and learning, offering a unique and accessible way to navigate the complex world of biomedical data.

Main Features

How to Enable Monarch Initiative for ChatGPT

How to Set Up and Use Monarch Initiative on ChatGPT

1. Logging into ChatGPT

To start using Monarch Initiative, first, ensure you are logged into your ChatGPT account. Visit the ChatGPT website and enter your login details to access your account.

2. Accessing the GPT-4 Plugin

Monarch Initiative Screenshot

If you are not subscribed: To access plugins like Monarch Initiative, you need to be a ChatGPT Plus subscriber. If you are not, click here to subscribe.

If you are subscribed: Navigate to the top of the page and click on "GPT-4." Then select "Plugins" and click on the label stating "No plugins enabled" to open the plugin store.

Monarch Initiative Screenshot

3. Finding Monarch Initiative

Monarch Initiative Screenshot

In the plugin store, use the search field to find the plugin. Type "Monarch Initiative" and press enter. You can refine your search using various filters such as release date or popularity to find other tools as well.

4. Enabling Monarch Initiative

Monarch Initiative Screenshot

Once you locate the plugin in the store:

Click "install" to add it to your ChatGPT. Return to the dashboard. Click on "GPT-4" at the top of the page. Choose Monarch Initiative from your list of installed plugins to activate it.

5. Getting Started

Now that Plugin is activated, it's time to learn the basics:

In the ChatGPT search prompt, type "Give me commands for Monarch Initiative." Follow the guided prompts to familiarize yourself with the plugin functions and features.

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